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Green Earth
But despite the fully explicated genome, the details of gene expression are still very mysterious. Spiraling pairs of cytosine, guanine, adenosine, and thymine: we know these are instructions for the development of life. We know the elements; we see the organisms. The code between them remains to be learned.
Mathematics continues to develop under the momentum of its own internal logic, seemingly independent of everything else. But several times in the past, purely mathematical developments have later proved to be powerfully descriptive of operations in nature that were either unknown or unexplainable at the time the math was being developed. This is a strange fact, calling into question all that we think we know about the relationship between math and reality, the mind and the cosmos.
Perhaps no explanation of this mysterious adherence of nature to mathematics of great subtlety will ever be forthcoming. Meanwhile, the operations called algorithms become ever more convoluted and interesting to those devising them. Are they making portraits, recipes, magic spells? Does reality use algorithms, do genes use algorithms? The mathematicians can’t say, and many of them don’t seem to care. They like the work.
Leo Mulhouse kissed his wife Roxanne and left their bedroom. The light was halfway between night and dawn. He went onto the balcony, heard the rumble of surf against the cliff. Out there lay the vast gray plate of the Pacific.
Leo had married into this clifftop house, so to speak; Roxanne had inherited it from her mother. Its view was something Leo loved, but the little grass yard below the second-story porch was only about fifteen feet wide, and beyond it was an open gulf of air and the gray foaming ocean, eighty feet below. And not that stable a cliff. He wished that the house had been placed a little farther back on its lot.
Back inside, down to the car. Down Europa, past the Pannikin in Leucadia, hang a right and head to work.
The Pacific Coast Highway in San Diego County was a beautiful drive at dawn. In any kind of weather it was handsome: in the sun with all the blues of the sea gleaming, in low clouds when shards and rays of horizontal sunlight broke through, or on rainy or foggy mornings when the narrow but rich palette of grays filled the eye. The gray dawns were the most frequent these days, as the region’s climate settled into what appeared to be a permanent El Niño—the Hyperniño, as people called it. The whole idea of a Mediterranean climate was leaving the world, even in the Mediterranean. Here coastal residents were getting sunlight deficiency disorders, and taking vitamin D and antidepressants to counteract the effects, even though ten miles inland it was a cloudless baking desert all the year round. The June Gloom had come to stay.
Leo took the coast highway to work every morning, enjoying the slight roller-coaster effect of dropping down to cross the lagoons, then rising back up to Cardiff, Solana Beach, and Del Mar. These towns looked best at this hour, deserted and as if washed for the day.
Then up the big hill onto Torrey Pines, past the golf course, quick right into Torrey Pines Generique. Down into its garage, into the biotech beast.
Complete security exam, metal detector, inspection by the bored security team, hardware and software check, sniff-over by Clyde the morning dog, trained to detect signature molecules: all standard in biotech now, after some notorious incidents of industrial espionage. The stakes were too high to trust anybody.
Then Leo was inside the compound, walking down long white hallways. He turned on his desktop screen, went out to check the experiments in progress. The most important current one was reaching an endpoint, and Leo was particularly interested in the result. It was a high-throughput screening of some of the proteins in the Protein Data Bank at UCSD, trying to identify ones that would make certain cells express much more high-density lipoprotein than they would normally. Ten times as much HDL, the “good cholesterol,” would be a lifesaver for people suffering from any number of ailments—atherosclerosis, obesity, diabetes, even Alzheimer’s. Any one of these ailments mitigated (or cured!) would be worth billions; a therapy that helped all of them would be—well. It explained the high-alert security enclosing the compound, that was for sure.
The experiment was proceeding but not yet done, so Leo went back to his office and read Bioworld Today on-screen. Robotics, artificial hormones, proteomic analyses—the whole industry was looking for therapeutic proteins, and ways to get those proteins into people. They were the recalcitrant problems, standing between “biotechnology” as an idea and medicine as it actually existed. If they didn’t solve these problems, the industry could go the way of nuclear power. If they did solve them, then it would be more like the computer industry in terms of financial returns—not to mention the impacts on health of course!
When Leo next checked the lab, two of his assistants, Marta and Brian, were standing at the bench, both wearing lab coats and rubber gloves, working the pipettes on a bank of flasks filling a countertop.
“Morning guys.”
“Hey Leo.” Marta aimed her pipette like a PowerPoint cursor at the small window on a long, low refrigerator. “Ready to check it out?”
“Sure am. Can you help?”
“In just a sec.” She moved down the bench.
Brian said, “This better work, because Derek just told the press that it was the most promising self-healing therapy of the decade.”
Leo was startled to hear this. “You’re kidding.”
“I’m not kidding.”
“No, please. Not really.”
“Really.”
“How could he?”
“Press release. Also calls to his favorite reporters, and on his webpage. The chat room is already talking about the ramifications. They’re betting one of the big pharms will buy us within the month.”
“Please Bri, don’t be saying these things.”
“Sorry, but you know Derek.” Brian gestured at one of the computer screens glowing on the bench across the way. “It’s all over.”
Leo squinted at a screen. “It wasn’t on Bioworld Today.”
“It will be tomorrow.”
The company’s website BREAKING NEWS box was blinking. Leo leaned over and jabbed it. Yep—lead story. HDL factory, potential for obesity, diabetes, Alzheimer’s, heart disease …
“Oh my God,” Leo muttered as he read. “Oh my God.” His face was flushed. “Why does he do this?”
“He wants it to be true.”
“So what? We don’t know yet.”
With her sly grin Marta said, “He wants you to make it happen, Leo. He’s like the Road Runner and you’re Wile E. Coyote. He gets you to run off the edge of a cliff, and then you have to build the bridge back to the cliff before you fall.”
“But it never works! Coyote always falls!”
Marta laughed at him. She liked him, but she was tough. “Come on,” she said. “This time we’ll do it.”
Leo nodded, tried to calm down. He appreciated Marta’s spirit, and liked to be at least as positive as the most positive person in any given situation. That was getting tough these days, but he smiled the best he could and said, “Yeah, right, you’re good,” and started to put on rubber gloves.
“Remember the time he announced that we had hemophilia A whipped?” Brian said.
“Please.”
“Remember the time he put out a press release saying he had decapitated mice at a thousand rpm to show how well our therapy worked?”
“The guillotine turntable experiment?”
“Please,” Leo begged. “No more.”
He picked up a pipette and tried to focus on the work. Withdraw, inject, withdraw, inject—alas, most of the work in this stage was automated, leaving people free to think, whether they wanted to or not. After a while Leo left them to it and went back to his office to check his e-mail, then helplessly to read what portion of Derek’s press release he could stomach. “Why does he do this, why?”
It was a rhetorical question, but Marta and Brian were now in his doorway, Marta implacable: “I told you—he thinks he can make us do it.”
“It’s not us doing it,” Leo protested, “it’s the gene. We can’t do a thing if the altered gene doesn’t get into the cell we’re trying to target.”
“You’ll just have to think of something that will work.”
“You mean like, build it and they will come?”
“Yeah. Say it and they will make it. That’s Derek.”
Out in the lab a timer beeped, sounding uncannily like the Road Runner. Beep-beep! Beep-beep! They went to the incubator and read the graph paper as it rolled out of the machine, like a receipt out of an automated teller—like money out of an automated teller, in fact, if the results were good. One very big wad of twenties rolling out into the world from nowhere, if the numbers were good.
And they were. They were very good. They would have to plot it to be sure, but they had been doing this series of experiments for so long that they knew what the raw data would look like. The data were good. So now they were like Wile E. Coyote, standing in midair staring amazed at the viewers, because a bridge from the cliff had magically extended out and saved them. Saved them from the long plunge of a retraction in the press and subsequent NASDAQ free fall.
Except that Wile E. Coyote was invariably premature in his sense of relief. The Road Runner always had another devastating move to make. Leo’s hand was shaking.
“Shit,” he said. “I would be totally celebrating right now if it weren’t for Derek. Look at this”—pointing—“it’s even better than before.”
“See, Derek knew it would turn out like this.”
“The fuck he did.”
“Pretty good numbers,” Brian said with a grin. “Paper’s almost written too. It’s just plug these in and do a conclusion.”
Marta said, “Conclusions will be simple, if we tell the truth.”
Leo nodded. “Only problem is, the truth would have to admit that even though this part works, we still don’t have a therapy, because we haven’t got targeted delivery. We can make it but we can’t get it into living bodies.”
“You didn’t read the whole website,” Marta told him, smiling angrily.
“What do you mean?” Leo was in no mood for teasing. His stomach had already shrunk to the size of a walnut.
Marta laughed, which was her way of showing sympathy without admitting to any. “He’s going to buy Urtech.”
“What’s Urtech?”
“They have a targeted delivery method that works.”
“What do you mean, what would that be?”
“It’s new. They just got awarded the patent on it.”
“Oh no.”
“Oh yes.”
“Oh my God. It hasn’t been validated?”
“Except by the patent, and Derek’s offer to buy it, no.”
“Oh my God. Why does he do this stuff?”
“Because he intends to be the CEO of the biggest pharmaceutical of all time. Like he told People magazine.”
“Yeah right.”
Torrey Pines Generique, like most biotech start-ups, was undercapitalized, and could only afford a few rolls of the dice. One of them had to look promising to attract the capital that would allow it to grow further. That was what they had been trying to accomplish for the five years of the company’s existence, and the effort was just beginning to show results with these experiments. What they needed now was to be able to insert their successfully tailored gene into the patient’s own cells, so that afterward it would be the patient’s own body producing increased amounts of the needed proteins. If that worked, there would be no immune response from the body’s immune system, and the patient would be not just helped, but cured.
Amazing.
But (and it was getting to be a big but) the problem of getting the altered DNA into living patients’ cells hadn’t been solved. Leo and his people were not physiologists, and they hadn’t been able to do it. No one had. Immune systems existed precisely to keep these sorts of intrusions from happening. Indeed, one method of inserting the altered DNA into the body was to put it into a virus and give the patient a viral infection, benign in its ultimate effects because the altered DNA reached its target. But since the body fought viral infections, it was not a good solution. You didn’t want to compromise further the immune systems of people who were already sick.
So, for a long time now they had been the same as everyone else chasing the holy grail of gene therapy, a “targeted nonviral delivery system.” Any company that came up with such a system, and patented it, would immediately be able to have the method licensed for scores of procedures, and very likely one of the big pharmaceuticals would buy the company, making everyone in it rich, and often still employed. Over time the pharmaceutical might dismantle the acquisition, keeping only the method, but at that point the start-up’s employees would be wealthy enough to laugh that off—retire and go surfing, or start up another start-up and try to hit the jackpot again. At that point it would be more of a philanthropic hobby than the cutthroat struggle to survive that it often seemed like before the big success arrived.
So the hunt for a targeted nonviral delivery system was most definitely on, in hundreds of labs around the world. And now Derek had bought one of these labs. Leo stared at the new announcement on the company website. Derek had to have bought it on spec, because if the method had been well proven, there was no way Derek would have been able to afford it. Some biotech firm even smaller than Torrey Pines—Urtech, based in Bethesda, Maryland (Leo had never heard of it)—had convinced Derek that they had found a way to deliver altered DNA into humans. Derek had made the purchase without consulting Leo, his chief research scientist. His scientific advice had to have come from his vice president, Dr. Sam Houston, his friend and partner. A man who had not done lab work in a decade.
So. It was true.
Leo sat at his desk, trying to relax his stomach. They would have to assimilate this new company, learn their technique, test it. It had been patented, Leo noted, which meant they had it exclusively at this point, as a kind of trade secret—a concept many working scientists had trouble accepting. A secret scientific method? Was that not a contradiction in terms? Of course a patent was a matter of public record, and eventually it would enter the public domain. So it wasn’t a trade secret in literal fact. But at this stage it was secret enough. And it could not be a sure thing. There wasn’t much published about it, as far as Leo could tell. Some papers in preparation, some submitted, one accepted—he would have to check that one out as soon as possible—and a patent. Sometimes they awarded them so early. Two papers were all that supported the whole approach.
Secret science. “God damn it,” Leo said to his room. Derek had bought a pig in a poke. And Leo was going to have to open the poke and poke around.
There was a hesitant knock on his opened door, and he looked up.
“Oh hi, Yann, how are you?”
“I’m good Leo, thanks. I’m just coming by to say good-bye. I’m back to Pasadena now, my job here is finished.”
“Too bad. I bet you could have helped us figure out this pig in a poke.”
“Really?”
Yann’s face brightened like a child’s. He was a true mathematician, and had what Leo considered to be the standard mathematician personality: smart, spacy, enthusiastic, full of notions. All these qualities were a bit under the surface, until you really got him going. As Marta had remarked, not unkindly (for her), if it weren’t for the head tilt and the speed-talking, he wouldn’t have seemed like a mathematician at all. Whatever; Leo liked him, and his work on protein identification had been really interesting, and potentially very helpful.
“I don’t know what we’ve got,” Leo admitted. “It’s likely to be a biology problem, but who knows? You sure have been helpful with selection protocols.”
“Thanks, I appreciate that. I may be back anyway, I’ve got a project going with Sam’s math team that might pan out. If it does they’ll try to hire me on another temporary contract, he says.”
“That’s good to hear. Well, have fun in Pasadena in the meantime.”
“Oh I will. See you soon.”
And their best biomath guy slipped out the door.
Charlie Quibler had barely woken when Anna left for work. He got up an hour later to his own alarm, woke Nick with difficulty, drove him to school with the sleeping Joe in his car seat, then returned home to fall asleep again on the couch, Joe never awake during the entire process. An hour or so later Joe would rouse them both with his hungry cries, and then the day would really begin.
“Joe and Dad!” Charlie would say then. “Here we go! How about breakfast? Here—how about you get into your playpen for a second, and I’ll go warm up some of Mom’s milk.”
“No!”
This routine had worked like a charm with Nick, but Joe refused to associate with baby things, as being an affront to his dignity.
So now Charlie had Joe there with him in the kitchen, crawling underfoot or investigating the gate that blocked the stairs to the cellar. A human pinball. “Okay watch out now, don’t. Don’t! Your bottle will be ready in a second.”
“Ba!”
“Yes, bottle.”
This was satisfactory, and Joe plopped on his butt directly under Charlie’s feet. Charlie worked over him, taking some of Anna’s frozen milk out of the freezer and putting it in a pot of warming water on the stove. Anna had her milk stored in precise quantities of either four or ten ounces, in tall or short permanent plastic cylinders that were filled with disposable plastic bags, and capped by brown rubber nipples topped by snap-on plastic tops to protect the nipples from contamination in the freezer. There was a lab book on the kitchen counter for Charlie to fill out the times and amounts of Joe’s feedings. Anna liked to know these things, she said, to determine how much milk to pump at work, but Charlie felt that the real purpose was to fulfill Anna’s pleasure in making quantified records of any kind.
He was testing the temperature of the thawed milk by taking a quick suck on the nipple when his phone rang. He whipped on a headset and answered.
“Hi Charlie, it’s Roy.”
“Oh hi Roy, what’s up.”
“Well I’ve got your latest draft here and I’m about to read it, and I thought I’d check to see what I should be looking for.”
“Oh yeah. The new stuff that matters is all in the third section.”
The bill as Charlie had drafted it for Phil would require the United States to act on certain recommendations of the Intergovernmental Panel on Climate Change.
“Did you kind of bury the part about us conforming to IPCC findings?”
“I don’t think there’s earth deep enough to bury that. I tried to make it look inevitable. International body we’re part of, climate change clearly real, the UN the best body to work through global issues, support for them pretty much mandatory or else the world cooks, that sort of thing.”
“Well, but that’s never worked before, has it? Come on, Charlie, this is Phil’s big pre-election bill and you’re his climate guy. If he can’t get this bill out of committee then we’re in big trouble.”
“Yeah I know. Wait just a second.”
Charlie took another test pull from the bottle. Now it was at body temperature, or almost.
“A bit early to be hitting the bottle, Charlie, what you drinking there?”
“Well, I’m drinking my wife’s breast milk, if you must know.”
“Say what?”
“I’m testing the temperature of one of Joe’s bottles. They have to be thawed to a very exact temperature or else he gets annoyed.”
“So you’re drinking your wife’s breast milk out of a baby bottle?”
“Yes I am.”
“How is it?”
“It’s good. Thin but sweet. A potent mix of protein, fat, and sugar. No doubt the perfect food.”
“I bet.” Roy cackled. “Do you ever get it straight from the source?”
“Well I try, sure, who doesn’t, but Anna doesn’t like it. She says it’s a mixed message and if I don’t watch out she’ll wean me when she weans Joe.”
“Aha. So you have to take the long-term view.”
“Yes. Although actually I tried it one time when Joe fell asleep nursing, so she couldn’t move without waking him. She was hissing at me and I was trying to get it to work but apparently you have to suck much harder than, you know, one usually would, there’s a trick to it, and I still hadn’t gotten any when Joe woke up and saw me. Anna and I froze, expecting him to freak out, but he just reached out and patted me on the head.”
“He understood!”
“Yeah. It was like he was saying I know how you feel, Dad, and I will share with you this amazing bounty. Didn’t you Joe?” he said, handing Joe the warmed bottle. He watched with a smile as Joe took it one-handed and tilted it back, elbow thrown out like Popeye with a can of spinach. Because of all the pinpricks Charlie had made in the rubber nipples, Joe could choke down a bottle in a few minutes, and he seemed to take great satisfaction in doing so. No doubt a sugar rush.
“Okay, well, you are a kinky guy my friend and obviously deep in the world of domestic bliss, but we’re still relying on you here and this may be the most important bill for Phil this session.”
“Come on, it’s a lot more than that, young man, it’s one of the few chances we have left to avoid complete global disaster, I mean—”
“Preaching to the converted! Preaching to the converted!”
“I certainly hope so.”
“Sure sure. Okay, I’ll read this draft and get back to you ASAP. I want to move on with this, and the committee discussion is now scheduled for Tuesday.”
“That’s fine, I’ll have my phone with me all day.”
“Sounds good, I’ll be in touch, but meanwhile be thinking about how to slip the IPCC thing in even deeper.”
“Yeah okay but see what I did already.”
“Sure bye.”
“Bye.”
Charlie pulled off the headset and turned off the stove. Joe finished his bottle, inspected it, tossed it casually aside.
“Man, you are fast,” Charlie said as he always did. One of the mutual satisfactions of their days together was doing the same things over and over, and saying the same things about them. Joe was not as insistent on pattern as Nick had been, in fact he liked a kind of structured variability, as Charlie thought of it, but the pleasure in repetition was still there.
Now Joe decided he would try again to climb the baby gate and dive down the cellar stairs, but Charlie moved quickly to detach him, then shooed him out into the dining room while cleaning up the counter, ignoring the loud cries of complaint.
“Okay okay! Quiet! Hey let’s go for a walk! Let’s go walk!”
“No!”
“Ah come on. Oh wait, it’s your day for Gymboree, and then we’ll go to the park and have lunch, and then go for a walk!”
“NO!”
But that was just Joe’s way of saying yes.
Charlie wrestled him into the baby backpack, which was mostly a matter of controlling his legs, not an easy thing. Joe was strong, a compact animal with bulging thigh muscles, and though not as loud a screamer as Nick had been, a tough guy to overpower. “Gymboree, Joe! You love it! Then a walk, guy, a walk to the park!”
Off they went.
First to Gymboree, located in a big building just off Wisconsin. Gymboree was a chance to get infants together when they did not have some other daycare to do it. It was an hour-long class, and always a bit depressing, Charlie felt, to be paying to get his kid into a play situation with other kids, but there it was; without Gymboree they all would have been on their own.
Joe disappeared into the tunnels of a big plastic jungle gym. It may have been a commercial replacement for real community, but Joe didn’t know that; all he saw was that it had lots of stuff to play with and climb on, and so he scampered around the colorful structures, crawling through tubes and climbing up things, ignoring the other kids to the point of treating them as movable parts of the apparatus, which could cause problems. “Oops, say you’re sorry, Joe. Sorry!”